=> Bootstrap dependency digest>=20010302: found digest-20190127
=> Checksum SHA1 OK for geos-3.9.0.tar.bz2
=> Checksum RMD160 OK for geos-3.9.0.tar.bz2
=> Checksum SHA512 OK for geos-3.9.0.tar.bz2
===> Installing dependencies for geos-3.9.0
=> Tool dependency libtool-base>=2.4.2nb9: found libtool-base-2.4.6nb2
=> Tool dependency nbpatch-[0-9]*: found nbpatch-20151107
=> Tool dependency checkperms>=1.1: found checkperms-1.12
=> Build dependency cwrappers>=20150314: found cwrappers-20180325
===> Skipping vulnerability checks.
WARNING: No /opt/pkg/pkgdb/pkg-vulnerabilities file found.
WARNING: To fix run: `/opt/pkg/sbin/pkg_admin -K /opt/pkg/pkgdb fetch-pkg-vulnerabilities'.
===> Overriding tools for geos-3.9.0
===> Extracting for geos-3.9.0
===> Patching for geos-3.9.0
=> Applying pkgsrc patches for geos-3.9.0
=> Verifying /opt/pkgsrc/geography/geos/patches/patch-ae
=> Applying pkgsrc patch /opt/pkgsrc/geography/geos/patches/patch-ae
Hmm...  Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-ae,v 1.8 2021/01/03 01:27:29 gdt Exp $
|
|TODO: explain what's in LDFLAGS.
|TODO: explain why --libs has -L in the first place (vs --ldflags).
|TODO: report upstream.
|
|--- tools/geos-config.in.orig	2020-07-21 18:07:17.000000000 +0000
|+++ tools/geos-config.in
--------------------------
Patching file tools/geos-config.in using Plan A...
Hunk #1 succeeded at 67.
done
===> Creating toolchain wrappers for geos-3.9.0
===> Configuring for geos-3.9.0
=> Modifying GNU configure scripts to avoid --recheck
=> Replacing config-guess with pkgsrc versions
=> Replacing config-sub with pkgsrc versions
=> Replacing install-sh with pkgsrc version
=> Fixing locale directory references.
=> Checking for portability problems in extracted files
checking build system type... aarch64-apple-darwin20
checking host system type... aarch64-apple-darwin20
checking target system type... aarch64-apple-darwin20
checking for GEOS version... "3.9.0"
checking for GEOS CAPI version... "1.16.2"
checking for a BSD-compatible install... /usr/bin/install -c -o sjmulder -g staff
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /opt/pkg-dev/bin/gmkdir -p
checking for gawk... /opt/pkg/bin/nawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether to enable maintainer-specific portions of Makefiles... no
checking whether make supports nested variables... (cached) yes
checking for aarch64-apple-darwin20-gcc... clang
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether clang accepts -g... yes
checking for clang option to accept ISO C89... none needed
checking for style of include used by make... GNU
checking dependency style of clang... gcc3
checking how to print strings... print -r
checking for a sed that does not truncate output... /opt/pkg/bin/nbsed
checking for grep that handles long lines and -e... (cached) /usr/bin/grep
checking for egrep... (cached) /usr/bin/egrep
checking for fgrep... /usr/bin/grep -F
checking for ld used by clang... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld
checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... (cached) 1048576
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking how to convert aarch64-apple-darwin20 file names to aarch64-apple-darwin20 format... func_convert_file_noop
checking how to convert aarch64-apple-darwin20 file names to toolchain format... func_convert_file_noop
checking for /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld option to reload object files... -r
checking for aarch64-apple-darwin20-objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for aarch64-apple-darwin20-dlltool... dlltool
checking how to associate runtime and link libraries... print -r --
checking for aarch64-apple-darwin20-ar... no
checking for ar... ar
checking for archiver @FILE support... no
checking for aarch64-apple-darwin20-strip... no
checking for strip... strip
checking for aarch64-apple-darwin20-ranlib... no
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from clang object... ok
checking for sysroot... no
checking for aarch64-apple-darwin20-mt... no
checking for mt... no
checking if : is a manifest tool... no
checking for aarch64-apple-darwin20-dsymutil... no
checking for dsymutil... dsymutil
checking for aarch64-apple-darwin20-nmedit... no
checking for nmedit... nmedit
checking for aarch64-apple-darwin20-lipo... no
checking for lipo... lipo
checking for aarch64-apple-darwin20-otool... no
checking for otool... otool
checking for aarch64-apple-darwin20-otool64... no
checking for otool64... no
checking for -single_module linker flag... yes
checking for -exported_symbols_list linker flag... yes
checking for -force_load linker flag... yes
checking how to run the C preprocessor... clang -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
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checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if clang supports -fno-rtti -fno-exceptions... yes
checking for clang option to produce PIC... -fno-common -DPIC
checking if clang PIC flag -fno-common -DPIC works... yes
checking if clang static flag -static works... no
checking if clang supports -c -o file.o... rm: conftest*: No such file or directory
yes
checking if clang supports -c -o file.o... (cached) yes
checking whether the clang linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin20 dyld
checking how to hardcode library paths into programs... immediate
checking for dlopen in -ldl... yes
checking whether a program can dlopen itself... yes
checking whether a statically linked program can dlopen itself... yes
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking whether we are using the GNU C++ compiler... yes
checking whether clang++ accepts -g... yes
checking dependency style of clang++... gcc3
checking how to run the C++ preprocessor... clang++ -E
checking for ld used by clang++... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld
checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no
checking whether the clang++ linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes
checking for clang++ option to produce PIC... -fno-common -DPIC
checking if clang++ PIC flag -fno-common -DPIC works... yes
checking if clang++ static flag -static works... no
checking if clang++ supports -c -o file.o... rm: conftest*: No such file or directory
yes
checking if clang++ supports -c -o file.o... (cached) yes
checking whether the clang++ linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin20 dyld
checking how to hardcode library paths into programs... immediate
checking for library containing strerror... none required
checking whether make sets $(MAKE)... (cached) yes
checking for dirent.h that defines DIR... yes
checking for library containing opendir... none required
checking whether closedir returns void... no
checking for working memcmp... yes
checking for strftime... yes
checking for vprintf... yes
checking for _doprnt... no
checking for size_t... yes
checking for working alloca.h... yes
checking for alloca... yes
checking for dirent.h that defines DIR... (cached) yes
checking for library containing opendir... (cached) none required
checking for ANSI C header files... (cached) yes
checking for memory.h... (cached) yes
checking for unistd.h... (cached) yes
checking ieeefp.h usability... no
checking ieeefp.h presence... no
checking for ieeefp.h... no
checking sys/file.h usability... yes
checking sys/file.h presence... yes
checking for sys/file.h... yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking for strchr... yes
checking for memcpy... yes
checking for gettimeofday... yes
checking whether stat file-mode macros are broken... no
checking whether struct tm is in sys/time.h or time.h... time.h
checking for size_t... (cached) yes
checking for an ANSI C-conforming const... yes
checking if requested to force inline functions... yes
checking if requested to enable assert macros... yes
checking if requested libstdc++ debug mode... no
checking whether we are using the GNU C++ compiler... (cached) yes
checking whether clang++ accepts -g... (cached) yes
checking dependency style of clang++... (cached) gcc3
checking whether clang++ supports C++11 features with -std=c++11... yes
checking whether C++ compiler accepts -Wsuggest-override -Werror... no
checking whether C++ compiler accepts -Wmissing-override -Werror... no
checking if clang++ supports -pedantic... yes
checking if clang++ supports -Wall... yes
checking if clang++ supports -Wno-long-long... yes
checking size of void *... 8
checking whether int64_t is 64 bits... no
checking whether long long int is 64 bits... yes
checking OS-specific settings... darwin20
checking for OS/X version... Mac OS X (Darwin 20.3.0 kernel)
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating tools/geos.pc
config.status: creating Makefile
config.status: creating capi/Makefile
config.status: creating capi/geos_c.h
config.status: creating doc/Doxyfile
config.status: creating doc/Makefile
config.status: creating macros/Makefile
config.status: creating src/Makefile
config.status: creating src/algorithm/Makefile
config.status: creating src/algorithm/construct/Makefile
config.status: creating src/algorithm/distance/Makefile
config.status: creating src/algorithm/locate/Makefile
config.status: creating src/edgegraph/Makefile
config.status: creating src/geom/Makefile
config.status: creating src/geom/prep/Makefile
config.status: creating src/geom/util/Makefile
config.status: creating src/geomgraph/Makefile
config.status: creating src/geomgraph/index/Makefile
config.status: creating include/Makefile
config.status: creating include/geos/Makefile
config.status: creating include/geos/algorithm/Makefile
config.status: creating include/geos/algorithm/locate/Makefile
config.status: creating include/geos/algorithm/distance/Makefile
config.status: creating include/geos/algorithm/construct/Makefile
config.status: creating include/geos/edgegraph/Makefile
config.status: creating include/geos/geom/Makefile
config.status: creating include/geos/geom/prep/Makefile
config.status: creating include/geos/geom/util/Makefile
config.status: creating include/geos/geomgraph/Makefile
config.status: creating include/geos/geomgraph/index/Makefile
config.status: creating include/geos/index/Makefile
config.status: creating include/geos/index/bintree/Makefile
config.status: creating include/geos/index/kdtree/Makefile
config.status: creating include/geos/index/chain/Makefile
config.status: creating include/geos/index/intervalrtree/Makefile
config.status: creating include/geos/index/quadtree/Makefile
config.status: creating include/geos/index/strtree/Makefile
config.status: creating include/geos/index/sweepline/Makefile
config.status: creating include/geos/io/Makefile
config.status: creating include/geos/linearref/Makefile
config.status: creating include/geos/math/Makefile
config.status: creating include/geos/noding/Makefile
config.status: creating include/geos/noding/snap/Makefile
config.status: creating include/geos/noding/snapround/Makefile
config.status: creating include/geos/operation/Makefile
config.status: creating include/geos/operation/buffer/Makefile
config.status: creating include/geos/operation/distance/Makefile
config.status: creating include/geos/operation/intersection/Makefile
config.status: creating include/geos/operation/linemerge/Makefile
config.status: creating include/geos/operation/overlay/Makefile
config.status: creating include/geos/operation/overlay/snap/Makefile
config.status: creating include/geos/operation/overlayng/Makefile
config.status: creating include/geos/operation/polygonize/Makefile
config.status: creating include/geos/operation/predicate/Makefile
config.status: creating include/geos/operation/relate/Makefile
config.status: creating include/geos/operation/sharedpaths/Makefile
config.status: creating include/geos/operation/union/Makefile
config.status: creating include/geos/operation/valid/Makefile
config.status: creating include/geos/planargraph/Makefile
config.status: creating include/geos/planargraph/algorithm/Makefile
config.status: creating include/geos/precision/Makefile
config.status: creating include/geos/simplify/Makefile
config.status: creating include/geos/triangulate/Makefile
config.status: creating include/geos/triangulate/quadedge/Makefile
config.status: creating include/geos/shape/Makefile
config.status: creating include/geos/shape/fractal/Makefile
config.status: creating include/geos/util/Makefile
config.status: creating include/geos/version.h
config.status: creating src/index/Makefile
config.status: creating src/index/bintree/Makefile
config.status: creating src/index/kdtree/Makefile
config.status: creating src/index/chain/Makefile
config.status: creating src/index/intervalrtree/Makefile
config.status: creating src/index/quadtree/Makefile
config.status: creating src/index/strtree/Makefile
config.status: creating src/index/sweepline/Makefile
config.status: creating src/io/Makefile
config.status: creating src/linearref/Makefile
config.status: creating src/math/Makefile
config.status: creating src/noding/Makefile
config.status: creating src/noding/snap/Makefile
config.status: creating src/noding/snapround/Makefile
config.status: creating src/operation/Makefile
config.status: creating src/operation/buffer/Makefile
config.status: creating src/operation/distance/Makefile
config.status: creating src/operation/intersection/Makefile
config.status: creating src/operation/linemerge/Makefile
config.status: creating src/operation/overlay/Makefile
config.status: creating src/operation/overlayng/Makefile
config.status: creating src/operation/polygonize/Makefile
config.status: creating src/operation/predicate/Makefile
config.status: creating src/operation/relate/Makefile
config.status: creating src/operation/sharedpaths/Makefile
config.status: creating src/operation/union/Makefile
config.status: creating src/operation/valid/Makefile
config.status: creating src/planargraph/Makefile
config.status: creating src/precision/Makefile
config.status: creating src/simplify/Makefile
config.status: creating src/triangulate/Makefile
config.status: creating src/triangulate/quadedge/Makefile
config.status: creating src/shape/Makefile
config.status: creating src/shape/fractal/Makefile
config.status: creating src/util/Makefile
config.status: creating tests/Makefile
config.status: creating tests/bigtest/Makefile
config.status: creating tests/unit/Makefile
config.status: creating benchmarks/Makefile
config.status: creating benchmarks/algorithm/Makefile
config.status: creating benchmarks/operation/Makefile
config.status: creating benchmarks/operation/buffer/Makefile
config.status: creating benchmarks/operation/predicate/Makefile
config.status: creating benchmarks/capi/Makefile
config.status: creating tests/xmltester/Makefile
config.status: creating tests/geostest/Makefile
config.status: creating tests/thread/Makefile
config.status: creating tools/Makefile
config.status: creating tools/geos-config
config.status: creating tools/astyle/Makefile
config.status: creating include/config.h
config.status: executing depfiles commands
config.status: executing libtool commands
rm: libtoolT: No such file or directory
=> Modifying libtool scripts to use pkgsrc libtool
=> Modifying libtool scripts to use pkgsrc depcomp